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BaseInfo

ncRNA ID	novel_osa_miR1412
Species	Oryza sativa
Class	miRNA
Genome position	Chr9:4279434-4279518 [+]
Reference genome	IRGSP-1.0
Source	SRR1742996
Length	24
Mature sequence(if miRNA)	1 - AAAAGGACCAAAUUGUGAAAAAUC - 24
Stem-loop(if miRNA)	--       C     UGU      ---UCC   U   UUC   U   AAAAGGA CAAAU   GAAAAA      AGC AGG   GAU C   ||||||| |||||   ||||||      ||| |||   ||| C   UUUUCUU GUUUA   CUUUUU      UUG UCC   CUG C CA       U     -UU      CUUCUU   U   CCA   A
Stem-loop sequence	AAAAGGACCAAAUUGUGAAAAAUCCAGCUAGGUUCGAUUCCCAGUCACCCCUUGUUUUCUUCUUUUUCUUAUUUGUUUCUUUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK240824.1	ncRNA:24   CUAAAAAGUGUUAAACCAGGAAAA   1   |||||||||||*|||||||||||| targets:1182   GAUUUUUCACAUUUUGGUCCUUUU   1205 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065013F08, full insert sequence	NA	coding protein	psRNATarget
AK287660.1	ncRNA:24   CUAAAAAGUGUUAAACCAGGAAAA   1   |||||||||||*|||||||||||| targets:2684   GAUUUUUCACAUUUUGGUCCUUUU   2707 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065112B21, full insert sequence	NA	coding protein	psRNATarget
AK241145.1	ncRNA:24   CUAAAAAGUGUUAAACCAGGAAAA   1   |||||||||||*|||||||||||| targets:2683   GAUUUUUCACAUUUUGGUCCUUUU   2706 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065112B21, full insert sequence	NA	coding protein	psRNATarget
AK288284.1	ncRNA:24   CUAAAAAGUGUUAAACCAGGAAAA   1   |||||||||||*|||||||||||| targets:200   GAUUUUUCACAUUUUGGUCCUUUU   223 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090018D15, full insert sequence	NA	coding protein	psRNATarget
AK071512.1	ncRNA:24   CUAAAAAGUGUUAAACCAGGAAAA   1   |||||||||||*|||||||||||| targets:1462   GAUUUUUCACAUUUUGGUCCUUUU   1485 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023098N15, full insert sequence	NA	coding protein	psRNATarget
AK288209.1	ncRNA:24   CUAAAAAGUGUUAAACCAGGAAAA   1   ||||||||||=|||||||*||||| targets:2805   GAUUUUUCACGAUUUGGUACUUUU   2828 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090009E19, full insert sequence	NA	coding protein	psRNATarget
AK068918.1	ncRNA:24   CUAAAAAGUGUUAAACCAGGAAAA   1   **|*|*||=||||||||||||||* targets:1190   UCUCUGUCGCAAUUUGGUCCUUUG   1213 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J013169C17, full insert sequence	NA	coding protein	psRNATarget