| ncRNA ID | novel_osa_miR1405 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr8:17311932-17312081 [-] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1742996;SRR4407958;SRR4407959;SRR1738222 |
| Length | 24 |
| Mature sequence(if miRNA) | 127 - AGAGACAGCGCUAGAUCCCUACGG - 150 |
| Stem-loop(if miRNA) |
--AG C C - C --- UC UA AUA G UC GU UCUGAUG AGACAGCG UAGAU CC UA GGCU AGCC AGUACG CCGG G GUCGA CAGGC AUC U |||||||| ||||| || || |||| |||| |||||| |||| | ||||| ||||| ||| UCUGUUGU AUCUG GG GU UCGA UCGG UUAUGU GGUU C CGGUU GUUCG CGG C UGUG - C U U UGU -- UC GUA G CU -G CCUAUAG |
| Stem-loop sequence | AGAGACAGCGCUAGAUCCCUACGGCUAGCCUCAGUACGUACCGGAUAGGGUCGAUCCAGGCGUAUCUCUGAUGUCGAUAUCCGGCGGCUUGUCUUGGCGCAUGUUGGCUUGUAUUGGCUUGUAGCUUUGUGGCGUCUAUGUUGUCUGUGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK288227.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090012F16, full insert sequence | NA | coding protein | psRNATarget |