ncRNA ID | novel_osa_miR1401 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:20029226-20029316 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1555747;SRR1556014;SRR4407961;SRR1556020 |
Length | 24 |
Mature sequence(if miRNA) | 68 - AUAUUAAUUGUGUGAUCUUUUGAG - 91 |
Stem-loop(if miRNA) |
--     A                             AAUCCCAA   CAAAA AUCACAUAAUUAAUAUAGCCAUUAAAACA        A   ||||| |||||||||||||||||||||||||||||        A   GUUUU UAGUGUGUUAAUUAUAUCGGUAAUUUUGU        G GA     C                             AUCGACUA |
Stem-loop sequence | CAAAAAAUCACAUAAUUAAUAUAGCCAUUAAAACAAAUCCCAAAAGAUCAGCUAUGUUUUAAUGGCUAUAUUAAUUGUGUGAUCUUUUGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK100382.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J023085F21, full insert sequence | NA | coding protein | psRNATarget |