ncRNA ID | novel_osa_miR1395 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:19322407-19322509 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742996;SRR2857728 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUCUAAGUUGCUAUAUUAUGGGAC - 24 |
Stem-loop(if miRNA) |
--                C   U        UA             U UAGA   CCCAUAAUAUAGCAAC UAG ACUGGAUG  ACAUUUUAUAGUG C    U   |||||||||||||||| ||| ||||||||  ||||||||||||| |   GGGUAUUAUAUCGUUG AUC UGACCUAC  UGUAAAGUAUCAU G    U CA                A   U        CC             - UUGC |
Stem-loop sequence | CCCAUAAUAUAGCAACCUAGUACUGGAUGUAACAUUUUAUAGUGUCUAGAUUCGUUGUACUAUGAAAUGUCCCAUCCAGUUCUAAGUUGCUAUAUUAUGGGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK101616.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J033052G09, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015791184.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC4343546), mRNA | G-type lectin S-receptor-like serine/threonine-protein kinase B120(LOC4343546) | coding protein | psRNATarget |