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BaseInfo

ncRNA ID novel_osa_miR1395
Species Oryza sativa
Class miRNA
Genome position Chr6:19322407-19322509 [-]
Reference genome IRGSP-1.0
Source SRR1742996;SRR2857728
Length 24
Mature sequence(if miRNA) 1 - UUCUAAGUUGCUAUAUUAUGGGAC - 24
Stem-loop(if miRNA) --                C   U        UA             U UAGA
  CCCAUAAUAUAGCAAC UAG ACUGGAUG  ACAUUUUAUAGUG C    U
  |||||||||||||||| ||| ||||||||  ||||||||||||| |
  GGGUAUUAUAUCGUUG AUC UGACCUAC  UGUAAAGUAUCAU G    U
CA                A   U        CC             - UUGC
Stem-loop sequence CCCAUAAUAUAGCAACCUAGUACUGGAUGUAACAUUUUAUAGUGUCUAGAUUCGUUGUACUAUGAAAUGUCCCAUCCAGUUCUAAGUUGCUAUAUUAUGGGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK101616.1
ncRNA:24   CAGGGUAUUAUAUCGUUGAAUCUU   1
  |||==|*||||||||||=||||||
targets:2789   GUCUUAAAAUAUAGCAAUUUAGAA   2812

2.5 Oryza sativa Japonica Group cDNA clone:J033052G09, full insert sequence NA coding protein psRNATarget
XM_015791184.1
ncRNA:24   CAGGGUAUUAUAUCGUUGAAUCUU   1
  |||==|*||||||||||=||||||
targets:3047   GUCUUAAAAUAUAGCAAUUUAGAA   3070

2.5 PREDICTED: Oryza sativa Japonica Group G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC4343546), mRNA G-type lectin S-receptor-like serine/threonine-protein kinase B120(LOC4343546) coding protein psRNATarget