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BaseInfo

ncRNA ID	novel_osa_miR1384
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:7609076-7609187 [+]
Reference genome	IRGSP-1.0
Source	SRR1742996;SRR1849771;SRR2040385
Length	24
Mature sequence(if miRNA)	89 - UUUCCGUGCCUAACGUUUGACCGU - 112
Stem-loop(if miRNA)	--             A      U    U  CUACACCUACUUAUUU   GACAUACUCCCUC   GGUUAAACGUUGG CACGGA ACCA GG                AGG             C   ||||||||||||| |||||| |||| ||                |||             G   CCAGUUUGCAAUC GUGCCU UGGU CC                CAG             U UG             C      U    C  -------------AAA   AAAAAAAAAACCC
Stem-loop sequence	GGUUAAACGUUGGACACGGAUACCAUGGCUACACCUACUUAUUUAGGGACAUACUCCCUCCGUCCCAAAAAAAAAAGACAAACCCUGGUUUCCGUGCCUAACGUUUGACCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK065567.1	ncRNA:24   UGCCAGUUUGCAAUCCGUGCCUUU   1   |||||||||||||=|||||||||| targets:969   ACGGUCAAACGUUGGGCACGGAAA   992 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013033D20, full insert sequence	NA	coding protein	psRNATarget
AK288264.1	ncRNA:24   UGCCAGUUUGCAAUCCGUGCCUUU   1   |||||||||||||=|||||||||| targets:99   ACGGUCAAACGUUGGGCACGGAAA   122 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090016E18, full insert sequence	NA	coding protein	psRNATarget
XM_015775382.1	ncRNA:24   UGCCAGUUUGCAAUCCGUGCCUUU   1   |||||||=|||||=|||||||||| targets:2434   ACGGUCAGACGUUGGGCACGGAAA   2457 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4332140 (LOC4332140), mRNA	uncharacterized LOC4332140(LOC4332140)	coding protein	psRNATarget
AK288660.1	ncRNA:24   UGCCAGUUUGCAAUCCGUGCCUUU   1   |=|||||||||||||*|||||||| targets:1508   AUGGUCAAACGUUAGACACGGAAA   1531 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090057N05, full insert sequence	NA	coding protein	psRNATarget
AK288706.1	ncRNA:24   UGCC-----AGUUUGCAAUCCGUGCCUUU   1   ||||-----|||||||||=|||||||||| targets:2712   ACGGACAAGUCAAACGUUGGGCACGGAAA   2740 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090061L24, full insert sequence	NA	coding protein	psRNATarget
XM_015783613.1	ncRNA:21   CAGUUUGCAAUCCGUGCCUUU   1   ||||||=|||||*|||||||| targets:1   GUCAAAUGUUAGACACGGAAA   21 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339531 (LOC4339531), mRNA	uncharacterized LOC4339531(LOC4339531)	coding protein	psRNATarget