Search result

BaseInfo

ncRNA ID novel_osa_miR1357
Species Oryza sativa
Class miRNA
Genome position Chr11:2547387-2547565 [-]
Reference genome IRGSP-1.0
Source SRR1742996;SRR2040394;SRR2040408
Length 24
Mature sequence(if miRNA) 156 - AUUUGCUCUGGCCCAACAAAAAGU - 179
Stem-loop(if miRNA) --           C          G        G                A  C   AUC                 C   C   --G AU
  AUUUGCUCUGG CCAACAAAAA UAUCUCGA GUACUGGUACCUCACG UA UAA   GUUUCCGAUCGUUGGAU UAG UGG   C  G
  ||||||||||| |||||||||| |||||||| |||||||||||||||| || |||   ||||||||||||||||| ||| |||   |
  UAAACGAGGCC GGUUGUUUUU AUAGAGCU CAUGGCCAUGGAGUGC AU GUU   CAAAGGCUAGCAACCUA AUU AUU   G  A
UC           A          A        A                C  A   CAA                 A   -   AUA AU
Stem-loop sequence AUUUGCUCUGGCCCAACAAAAAGUAUCUCGAGGUACUGGUACCUCACGAUACUAAAUCGUUUCCGAUCGUUGGAUCUAGCUGGGCAUGAUAGAUAUUAUUAAAUCCAACGAUCGGAAACAACUUGAUACCGUGAGGUACCGGUACAUCGAGAUAAUUUUUGUUGGACCGGAGCAAAUCU