ncRNA ID | novel_osa_miR1357 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:2547387-2547565 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742996;SRR2040394;SRR2040408 |
Length | 24 |
Mature sequence(if miRNA) | 156 - AUUUGCUCUGGCCCAACAAAAAGU - 179 |
Stem-loop(if miRNA) |
--           C          G        G                A  C   AUC                 C   C   --G AU   AUUUGCUCUGG CCAACAAAAA UAUCUCGA GUACUGGUACCUCACG UA UAA   GUUUCCGAUCGUUGGAU UAG UGG   C  G   ||||||||||| |||||||||| |||||||| |||||||||||||||| || |||   ||||||||||||||||| ||| |||   |   UAAACGAGGCC GGUUGUUUUU AUAGAGCU CAUGGCCAUGGAGUGC AU GUU   CAAAGGCUAGCAACCUA AUU AUU   G  A UC           A          A        A                C  A   CAA                 A   -   AUA AU |
Stem-loop sequence | AUUUGCUCUGGCCCAACAAAAAGUAUCUCGAGGUACUGGUACCUCACGAUACUAAAUCGUUUCCGAUCGUUGGAUCUAGCUGGGCAUGAUAGAUAUUAUUAAAUCCAACGAUCGGAAACAACUUGAUACCGUGAGGUACCGGUACAUCGAGAUAAUUUUUGUUGGACCGGAGCAAAUCU |