ncRNA ID | novel_osa_miR1348 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:9247502-9247599 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742995 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGAAUAUAGUCAAUGCUAGAAAG - 24 |
Stem-loop(if miRNA) |
--          -   CAC         A               A    A   UUCUAGCAUU ACU   AUUCAUAUA AUGUUAAUGAAUCUA ACAU U   |||||||||| |||   ||||||||| ||||||||||||||| ||||   AAGAUCGUAA UGA   UAAGUAUAU UACGAUUACUUAGAU UGUG A GA          C   -UA         C               A    U |
Stem-loop sequence | UUCUAGCAUUACUCACAUUCAUAUAAAUGUUAAUGAAUCUAAACAUAUAUGUGUAUAGAUUCAUUAGCAUCUAUAUGAAUAUAGUCAAUGCUAGAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK067363.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013100G02, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015786027.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group ABC transporter C family member 8 (LOC9267441), mRNA | ABC transporter C family member 8(LOC9267441) | coding protein | psRNATarget |