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BaseInfo

ncRNA ID	novel_osa_miR1344
Species	Oryza sativa
Class	miRNA
Genome position	Chr9:2510308-2510438 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1556014
Length	21
Mature sequence(if miRNA)	111 - UCCCAUCGUGCGGCUCGGCAA - 131
Stem-loop(if miRNA)	--UCC      -  -     --   ---A  G   -CC      --C   A -    C  UCUUUCUCCCU      CAUCGU GC GGCUC  GGC    AU GCC   CUGGUU   GGC C GGUG GA           C      |||||| || |||||  |||    || |||   ||||||   ||| | |||| ||           U      GUAGCA CG CCGAG  UCG    UA UGG   GAUCGG   CUG G CCAC CU           C ACGCA      G  U     UG   GCGG  G   CAA      UAA   C U    -  CACCCUUUCCC
Stem-loop sequence	UCCCAUCGUGCGGCUCGGCAAUGGCCCCCUGGUUCGGCACGGUGCGAUCUUUCUCCCUCUCCCCUUUCCCACUCCACCUGCGUCAAUGGCUAGAACGGUGAUGGCGGCUGUGAGCCUGCGACGAUGACGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015769153.1	ncRNA:21   AACGGCUCGGCGUGCUACCCU   1   *|||*||||=||||||||||| targets:1610   GUGCAGAGCUGCACGAUGGGA   1630 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At1g09900 (LOC4329341), mRNA	pentatricopeptide repeat-containing protein At1g09900(LOC4329341)	coding protein	psRNATarget
AK120602.1	ncRNA:21   AACGGCUCGGCGUGCUACCCU   1   *|||*||||=||||||||||| targets:1610   GUGCAGAGCUGCACGAUGGGA   1630 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013149K24, full insert sequence	NA	coding protein	psRNATarget