| ncRNA ID | ath-miR5028 |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr4:6546647-6546827 [-] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 123 - AAUUGGGUUUAUGCUAGAGUU - 143 |
| Stem-loop(if miRNA) |
GUUGCCGU GUUC - - U A UAU C AA C C AA - A C CGUC AACUC GC CUG AGGA AAUGAUC AUUGGGUU G UAGAGUU AU GGGU UUGA AGA GAAGGA GUUG A |||| ||||| || ||| |||| ||||||| |||||||| | ||||||| || |||| |||| ||| |||||| |||| GUAG UUGAG CG GAC UCUU UUACUAG UAACCCAA C AUCUCAA UA CCCA GACU UCU UUUCCU CAGC U -AGUUAUU --AU A A U C CUU A CC U C CC A - G |
| Stem-loop sequence | CGUCGUUGCCGUAACUCGUUCGCCUGAGGAUAAUGAUCAAUUGGGUUUAUGCUAGAGUUAAAUCGGGUCUUGAAAAGAGAAGGAAGUUGCAUGCGACUCCUUUAUCUCCUCAGCACCCUAUCCAACUCUAACUUCAACCCAAUCGAUCAUUUUUCUACAGAGCUAGAGUUUUAUUGAGAUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NM_111836.5 |
|
2.5 | Arabidopsis thaliana demeter-like 2 (DML2), partial mRNA | demeter-like 2(DML2) | coding protein | psRNATarget | |||||||||
| NM_001337853.1 |
|
2.5 | Arabidopsis thaliana demeter-like 2 (DML2), mRNA | demeter-like 2(DML2) | coding protein | psRNATarget |
| 1 | PMID:21357774
"MicroRNA activity in the Arabidopsis male germline"; Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD; J Exp Bot. 62:1611-1620(2011). |