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BaseInfo

ncRNA ID	novel_osa_miR1337
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:27155481-27155548 [-]
Reference genome	IRGSP-1.0
Source	SRR1742995;SRR2040385;SRR2040386;SRR2040387;SRR3123650;SRR1738239
Length	24
Mature sequence(if miRNA)	45 - AAGAGAUUUUAGGUGAAUAUGACA - 68
Stem-loop(if miRNA)	--   A              A   C C      G   AAG GAUUUUAGGUGAAU UGA A AUCAUA U   ||| |||||||||||||| ||| | ||||||   UUC CUAAAGUCUAUUUA ACU U UAGUAU A UA   C              C   A A      A
Stem-loop sequence	AAGAGAUUUUAGGUGAAUAUGACACAUCAUAGUAAUAUGAUAUAUCACAUUUAUCUGAAAUCCCUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK069433.1	ncRNA:24   ACA--GUAUAAGUGGAUUUUAGAGAA   1   |||--|||||*||||||||||||||| targets:366   UGUAUCAUAUCCACCUAAAAUCUCUU   391 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023025M19, full insert sequence	NA	coding protein	psRNATarget
AK288272.1	ncRNA:24   ACAGUAUAAGUGGAUUUUAGAGAA   1   ||||||||*||||||||||*|||| targets:1129   UGUCAUAUGCACCUAAAAUAUCUU   1152 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090017B03, full insert sequence	NA	coding protein	psRNATarget
XM_015794062.1	ncRNA:24   ACA--GUAUAAGUGGAUUUUAGAGAA   1   |||--|||||||*=|||||||||||| targets:1096   UGUAUCAUAUUCUUCUAAAAUCUCUU   1121 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group transcription factor AIG1 (LOC4345836), mRNA	transcription factor AIG1(LOC4345836)	coding protein	psRNATarget
AK107101.1	ncRNA:24   ACA--GUAUAAGUGGAUUUUAGAGAA   1   |||--|||||*||||||||||=|||| targets:942   UGUGACAUAUGCACCUAAAAUUUCUU   967 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-122-A04, full insert sequence	NA	coding protein	psRNATarget
XM_015761223.1	ncRNA:24   ACA--GUAUAAGUGGAUUUUAGAGAA   1   |||--|||||*||||||||||=|||| targets:936   UGUGACAUAUGCACCUAAAAUUUCUU   961 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350921 (LOC4350921), mRNA	uncharacterized LOC4350921(LOC4350921)	coding protein	psRNATarget
AK107726.1	ncRNA:24   ACA--GUAUAAGUGGAUUUUAGAGAA   1   |||--|||||||*=|||||||||||| targets:498   UGUAUCAUAUUCUUCUAAAAUCUCUU   523 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-132-F02, full insert sequence	NA	coding protein	psRNATarget