ncRNA ID | novel_osa_miR1335 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:27189068-27189161 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742995 |
Length | 24 |
Mature sequence(if miRNA) | 71 - AUAUCUUGUUAGAUUCGUCUCACA - 94 |
Stem-loop(if miRNA) |
--C         A            C   C C   U  A  GGAUGA    GAGACGAAU UAACGAGGUAUA UAA C AUG UU GC      U    ||||||||| |||||||||||| ||| | ||| || ||    CUCUGCUUA AUUGUUCUAUAU AUU G UAC AA CG      U ACA         G            A   A A   U  A  AUGUUA |
Stem-loop sequence | CGAGACGAAUAUAACGAGGUAUACUAACCCAUGUUUAGCGGAUGAUUAUUGUAGCAAAUCAUAGAUUAAUAUAUCUUGUUAGAUUCGUCUCACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015762321.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group transcription initiation factor TFIID subunit 13 (LOC9268703), mRNA | transcription initiation factor TFIID subunit 13(LOC9268703) | coding protein | psRNATarget |