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BaseInfo

ncRNA ID	novel_osa_miR1332
Species	Oryza sativa
Class	miRNA
Genome position	Chr7:7804366-7804458 [-]
Reference genome	IRGSP-1.0
Source	SRR1742995
Length	21
Mature sequence(if miRNA)	73 - UUGUUAAUAUAUAUUUCGAUU - 93
Stem-loop(if miRNA)	--U   UA          C           UUAUAU   CUCGGCAUGG    UGU  AUAUAUAUUU GAUUAAGUGAU      UGU          C    |||  |||||||||| |||||||||||      |||    ACA  UGUAUAUGAA UUAAUUCACUA      CCC          G AGU   GC          U           -----A   UAUCUAGCUA
Stem-loop sequence	UUGUUAAUAUAUAUUUCGAUUAAGUGAUUUAUAUUGUCUCGGCAUGGCGAUCGAUCUAUCCCAAUCACUUAAUUUAAGUAUAUGUCGACAUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288616.1	ncRNA:21   UUAGCUUUAUAUAUAAUUGUU   1   =|||||||||||||||||||| targets:2098   GAUCGAAAUAUAUAUUAACAA   2118 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090054A10, full insert sequence	NA	coding protein	psRNATarget
AK064569.1	ncRNA:21   UUAGCUUUAUAUAUAAUUGUU   1   =||=||||||||||||||=|| targets:44   GAUUGAAAUAUAUAUUAAUAA   64 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-112-D07, full insert sequence	NA	coding protein	psRNATarget
XM_015786683.1	ncRNA:21   UUAG-CUUUAUAUAUAAUUGUU   1   *|||-||||||||||||||||| targets:1106   CAUCAGAAAUAUAUAUUAACAA   1127 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group polygalacturonase non-catalytic subunit AroGP3 (LOC9268400), transcript variant X1, mRNA	polygalacturonase non-catalytic subunit AroGP3(LOC9268400)	coding protein	psRNATarget
XM_015786684.1	ncRNA:21   UUAG-CUUUAUAUAUAAUUGUU   1   *|||-||||||||||||||||| targets:1106   CAUCAGAAAUAUAUAUUAACAA   1127 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group polygalacturonase non-catalytic subunit AroGP3 (LOC9268400), transcript variant X2, mRNA	polygalacturonase non-catalytic subunit AroGP3(LOC9268400)	coding protein	psRNATarget
AK106070.1	ncRNA:21   UUAG-CUUUAUAUAUAAUUGUU   1   *|||-||||||||||||||||| targets:108   CAUCAGAAAUAUAUAUUAACAA   129 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:001-206-H06, full insert sequence	NA	coding protein	psRNATarget
AK288643.1	ncRNA:21   UUAGCUUUAUAUAUAAUUGUU   1   *=|=||||||||||||||=|| targets:1156   UGUUGAAAUAUAUAUUAAUAA   1176 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090056G13, full insert sequence	NA	coding protein	psRNATarget