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BaseInfo

ncRNA ID novel_osa_miR1327
Species Oryza sativa
Class miRNA
Genome position Chr11:7174131-7174346 [+]
Reference genome IRGSP-1.0
Source SRR1742995;SRR1742996;SRR1556011;SRR1738211;SRR1738222
Length 24
Mature sequence(if miRNA) 1 - CAGAAAUCUGUACAAGCCCGGGAU - 24
Stem-loop(if miRNA) --C                                               A                            A          A           UAUU  U
   AGAAAUCUGUACAAGCCCGGGAUGCCACUAAAGAACCCUUUUAAAGU CCAAAACAAAGAAAUUUCGGCAGCACCU UUUUAAAAGA AUAUAAAUAUA    GA G
   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||    ||
   UCUUUAGAUGUGUUCGGGUCCUACGGUGAUUUCUUGGGAAAAUUUCA GGUUUUGUUUCUUUAAAGCUGUCGUGGA GAAAUUUUUU UAUAUUUAUAU    CU C
GGA                                               C                            -          A           -CGC  U
Stem-loop sequence CAGAAAUCUGUACAAGCCCGGGAUGCCACUAAAGAACCCUUUUAAAGUACCAAAACAAAGAAAUUUCGGCAGCACCUAUUUUAAAAGAAAUAUAAAUAUAUAUUGAUGCUUCCGCUAUAUUUAUAUAUUUUUUAAAGAGGUGCUGUCGAAAUUUCUUUGUUUUGGCACUUUAAAAGGGUUCUUUAGUGGCAUCCUGGGCUUGUGUAGAUUUCUAGG