ncRNA ID | novel_osa_miR1327 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:7174131-7174346 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742995;SRR1742996;SRR1556011;SRR1738211;SRR1738222 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAGAAAUCUGUACAAGCCCGGGAU - 24 |
Stem-loop(if miRNA) |
--C                                               A                            A          A           UAUU  U    AGAAAUCUGUACAAGCCCGGGAUGCCACUAAAGAACCCUUUUAAAGU CCAAAACAAAGAAAUUUCGGCAGCACCU UUUUAAAAGA AUAUAAAUAUA    GA G    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||    ||    UCUUUAGAUGUGUUCGGGUCCUACGGUGAUUUCUUGGGAAAAUUUCA GGUUUUGUUUCUUUAAAGCUGUCGUGGA GAAAUUUUUU UAUAUUUAUAU    CU C GGA                                               C                            -          A           -CGC  U |
Stem-loop sequence | CAGAAAUCUGUACAAGCCCGGGAUGCCACUAAAGAACCCUUUUAAAGUACCAAAACAAAGAAAUUUCGGCAGCACCUAUUUUAAAAGAAAUAUAAAUAUAUAUUGAUGCUUCCGCUAUAUUUAUAUAUUUUUUAAAGAGGUGCUGUCGAAAUUUCUUUGUUUUGGCACUUUAAAAGGGUUCUUUAGUGGCAUCCUGGGCUUGUGUAGAUUUCUAGG |