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BaseInfo

ncRNA ID novel_osa_miR1322
Species Oryza sativa
Class miRNA
Genome position Chr8:3929088-3929168 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1556011;SRR1556014;SRR1654490
Length 21
Mature sequence(if miRNA) 61 - UGGGACGGAGGGGUAUGUAUG - 81
Stem-loop(if miRNA) --       UA       AA      U  -AUU     UUA
  UAUAUAC  CUCUGUC  AAAAAA GA    CCUAG   C
  |||||||  |||||||  |||||| ||    |||||
  AUGUAUG  GAGGCAG  UUUUUU CU    GGAUC   G
GU       GG       GG      U  AGUU     UAA
Stem-loop sequence UAUAUACUACUCUGUCAAAAAAAAUGAAUUCCUAGUUACGAAUCUAGGUUGAUCUUUUUUUGGGACGGAGGGGUAUGUAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK064579.1
ncRNA:21   GUAUGUAUGGGGAGGCAGGGU   1
  =||||*|||||||||||||=|
targets:950   UAUACUUACCCCUCCGUCCUA   970

2.5 Oryza sativa Japonica Group cDNA clone:002-112-E11, full insert sequence NA coding protein psRNATarget