ncRNA ID | novel_osa_miR1322 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:3929088-3929168 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1556011;SRR1556014;SRR1654490 |
Length | 21 |
Mature sequence(if miRNA) | 61 - UGGGACGGAGGGGUAUGUAUG - 81 |
Stem-loop(if miRNA) |
--       UA       AA      U  -AUU     UUA   UAUAUAC  CUCUGUC  AAAAAA GA    CCUAG   C   |||||||  |||||||  |||||| ||    |||||   AUGUAUG  GAGGCAG  UUUUUU CU    GGAUC   G GU       GG       GG      U  AGUU     UAA |
Stem-loop sequence | UAUAUACUACUCUGUCAAAAAAAAUGAAUUCCUAGUUACGAAUCUAGGUUGAUCUUUUUUUGGGACGGAGGGGUAUGUAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK064579.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-112-E11, full insert sequence | NA | coding protein | psRNATarget |