ncRNA ID | novel_osa_miR1319 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:6145837-6145894 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742995 |
Length | 24 |
Mature sequence(if miRNA) | 35 - CACGGAUCCUCUGCAGUACUGCAC - 58 |
Stem-loop(if miRNA) |
-CA   A   -    -    -     -  U    CGG UCC UCUG CAGU ACUGC AC U    ||| ||| |||| |||| ||||| || G    GCC AGG GGAC GUCG UGACG UG C CUG   C   U    A    G     A  A |
Stem-loop sequence | CACGGAUCCUCUGCAGUACUGCACUUGCAGUAGCAGUGGCUGACAGGUGGACCCGGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015769868.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329342 (LOC4329342), transcript variant X2, mRNA | uncharacterized LOC4329342(LOC4329342) | coding protein | psRNATarget | |||||||||
XM_015769867.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329342 (LOC4329342), transcript variant X1, mRNA | uncharacterized LOC4329342(LOC4329342) | coding protein | psRNATarget |