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BaseInfo

ncRNA ID	novel_osa_miR1314
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:21832032-21832164 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1556014
Length	22
Mature sequence(if miRNA)	112 - UUGCCUGUAAACUGCGAGACGA - 133
Stem-loop(if miRNA)	--    C      C              A  A          AUCC     ----UA    A   UUACU   UUGC UGUAAA UGCGAGACGAAUCU UU AGCCUAAUUA    GUCAU      GCAA UAU     A   |||| |||||| |||||||||||||| || ||||||||||    |||||      |||| |||     U   AACG ACAUUU ACGCUCUGCUUAGA AA UCGGAUUAAU    CAGUA      CGUU AUA     A CA    U      A              A  C          ---A     CUAAAC    -   UCACG
Stem-loop sequence	UUGCCUGUAAACUGCGAGACGAAUCUAUUAAGCCUAAUUAAUCCGUCAUUAGCAAAUAUUUACUAUAGCACUAUAUUGCCAAAUCAUGACAUAAUUAGGCUCAAAAGAUUCGUCUCGCAAUUUACAUGCAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK067578.1	ncRNA:22   AGCAGAGCGUCAAAUGUCCGUU   1   ||||||||||||||||||||== targets:1770   UCGUCUCGCAGUUUACAGGCGG   1791 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013110M15, full insert sequence	NA	coding protein	psRNATarget
AK241427.1	ncRNA:22   AGCAGAGCGUCAAAUGUCCGUU   1   |||||||||=|||||||||||* targets:1530   UCGUCUCGCGGUUUACAGGCAU   1551 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065161N01, full insert sequence	NA	coding protein	psRNATarget
AK099913.1	ncRNA:22   AGCAGAGCGUCAAAUGUCCGUU   1   |=||||||||||||||||||== targets:803   UUGUCUCGCAGUUUACAGGCGG   824 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013116E13, full insert sequence	NA	coding protein	psRNATarget
AM778048.1	ncRNA:22   AGCAGAGCGUCAAAUGUCCGUU   1   |=||||||||||||||||||== targets:73   UUGUCUCGCAGUUUACAGGCGG   94 Target Full Sequence	2.5	Oryza sativa Japonica Group mRNA for putative pre-mRNA-splicing factor cwc-22 (Os12g15420 gene), cultivar Azucena	NA	coding protein	psRNATarget
AK064922.1	ncRNA:22   AGCAGAGCGUCAAAUGUCCGUU   1   |=||||||||||||||||||== targets:2046   UUGUCUCGCAGUUUACAGGCGG   2067 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013000N12, full insert sequence	NA	coding protein	psRNATarget
XM_015764825.1	ncRNA:22   AGCAGAGCGUCAAAUGUCCGUU   1   |=||||||||||||||||||== targets:73   UUGUCUCGCAGUUUACAGGCGG   94 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group pre-mRNA-splicing factor CWC22 homolog (LOC4351904), mRNA	pre-mRNA-splicing factor CWC22 homolog(LOC4351904)	coding protein	psRNATarget
AK288682.1	ncRNA:22   AGCAGAGCGUCAAAUGUCCGUU   1   ||*|||||||||||||||||== targets:443   UCAUCUCGCAGUUUACAGGCGG   464 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090059I11, full insert sequence	NA	coding protein	psRNATarget
CT837676.1	ncRNA:22   AGCAGAGCGUCAAAUGUCCGUU   1   ||*||||||||||||||*|||= targets:464   UCAUCUCGCAGUUUACAAGCAG   485 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN028D22, full insert sequence	NA	coding protein	psRNATarget
AK288343.1	ncRNA:22   AGCAGAGCGUCAAAUGUCCGUU   1   |=|*|||*|||||||||||||= targets:358   UUGCCUCACAGUUUACAGGCAG   379 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090023K08, full insert sequence	NA	coding protein	psRNATarget