ncRNA ID | novel_osa_miR1313 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:1116049-1116121 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742995 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAUGUCACAUACCGUACUAGAUAG - 24 |
Stem-loop(if miRNA) |
--AC       U A    A       CA  U   AC     CUAGUAC G AUGU ACAUCAU  CC AGU  U     ||||||| | |||| |||||||  || |||  A     GAUCAUG C UACA UGUAGUG  GG UUA  U GAUA       C A    C       CA  U   AG |
Stem-loop sequence | ACCUAGUACUGAAUGUAACAUCAUCACCUAGUACUAUGAAUUUGGACGUGAUGUCACAUACCGUACUAGAUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015788811.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277009 (LOC107277009), transcript variant X1, mRNA | uncharacterized LOC107277009(LOC107277009) | coding protein | psRNATarget |