ncRNA ID | novel_osa_miR1294 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:33261792-33261881 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742995 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAAAGAGAAAUGACUAUAAGG - 21 |
Stem-loop(if miRNA) |
--    UU      -    GA   --UU  C       GGGGUAAAU   UUGU  GUCAUU CUCU  UCU    UG CGGCAUC         A   ||||  |||||| ||||  |||    || |||||||   AAUA  CAGUAA GAGA  AGA    AC GUUGUGG         A GG    -U      A    AA   UGGU  U       AGAGGGGGG |
Stem-loop sequence | UUGUUUGUCAUUCUCUGAUCUUUUGCCGGCAUCGGGGUAAAUAAGGGGGGAGAGGUGUUGUCAUGGUAGAAAAGAGAAAUGACUAUAAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015771557.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group abscisic acid receptor PYL8 (LOC4328916), transcript variant X2, mRNA | abscisic acid receptor PYL8(LOC4328916) | coding protein | psRNATarget |