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BaseInfo

ncRNA ID novel_osa_miR1294
Species Oryza sativa
Class miRNA
Genome position Chr2:33261792-33261881 [-]
Reference genome IRGSP-1.0
Source SRR1742995
Length 21
Mature sequence(if miRNA) 1 - AAAAGAGAAAUGACUAUAAGG - 21
Stem-loop(if miRNA) --    UU      -    GA   --UU  C       GGGGUAAAU
  UUGU  GUCAUU CUCU  UCU    UG CGGCAUC         A
  ||||  |||||| ||||  |||    || |||||||
  AAUA  CAGUAA GAGA  AGA    AC GUUGUGG         A
GG    -U      A    AA   UGGU  U       AGAGGGGGG
Stem-loop sequence UUGUUUGUCAUUCUCUGAUCUUUUGCCGGCAUCGGGGUAAAUAAGGGGGGAGAGGUGUUGUCAUGGUAGAAAAGAGAAAUGACUAUAAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015771557.1
ncRNA:21   GGAAUAUCAGUAAAGAGAAAA   1
  =|||||*|||||||||=||||
targets:730   UCUUAUUGUCAUUUCUUUUUU   750

2.5 PREDICTED: Oryza sativa Japonica Group abscisic acid receptor PYL8 (LOC4328916), transcript variant X2, mRNA abscisic acid receptor PYL8(LOC4328916) coding protein psRNATarget