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BaseInfo

ncRNA ID	novel_osa_miR1283
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:15033329-15033500 [-]
Reference genome	IRGSP-1.0
Source	SRR1742995
Length	24
Mature sequence(if miRNA)	1 - GGUCAAAUAUUGGACGCGGAAACC - 24
Stem-loop(if miRNA)	--        -    C          CC       A      UUUUU    AUUAGUAUUUUCAUUGUUGUUAGAUGAUAAAACAUG   UUUUCGUG CCAA AUUUGACUGU  GUCUUAU UGAAAA     UAUA                                    A   |||||||| |||| ||||||||||  ||||||| ||||||     ||||   AAAGGCGC GGUU UAAACUGGCA  CAGAAUA ACUUUU     UACU                                    U CC        A    A          UU       A      -UUAA    UUUUUUAAUUUUUCUAUUCAGUGCAUAUUUCAUAAU
Stem-loop sequence	UUUUCGUGCCAACAUUUGACUGUCCGUCUUAUAUGAAAAUUUUUUAUAAUUAGUAUUUUCAUUGUUGUUAGAUGAUAAAACAUGAUUAAUACUUUAUACGUGACUUAUCUUUUUAAUUUUUUUCAUAAUUUUUUCAAAUAAGACUUACGGUCAAAUAUUGGACGCGGAAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288787.1	ncRNA:24   CCAAAGGCGCAGGUUAUAAACUGG   1   |||||||||||||||||||||||| targets:1735   GGUUUCCGCGUCCAAUAUUUGACC   1758 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090069N24, full insert sequence	NA	coding protein	psRNATarget
CT827991.1	ncRNA:24   CCAAAGGCGCAGGUUAUAAACUGG   1   |*||||||=||||||*|||||||| targets:650   GAUUUCCGUGUCCAACAUUUGACC   673 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128H03, full insert sequence	NA	coding protein	psRNATarget
AK106724.1	ncRNA:24   CCAAAGGCGCAGGUUAUAAACUGG   1   |*||||||=||||||*|||||||| targets:663   GAUUUCCGUGUCCAACAUUUGACC   686 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-114-G11, full insert sequence	NA	coding protein	psRNATarget
AK120358.1	ncRNA:24   CCAAAGGCGCAGGUUAUAAACUGG   1   |***||||=||||||*|||||||| targets:1059   GAAAUCCGUGUCCAACAUUUGACC   1082 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013067F13, full insert sequence	NA	coding protein	psRNATarget