ncRNA ID | novel_osa_miR1282 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:23018148-23018197 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR2099428;SRR2099436;SRR2099745;SRR1556014;SRR4407956 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAUCAACUGGGACUAAAGAUGGC - 24 |
Stem-loop(if miRNA) |
--       CU    C        G   AUAUCAA  GGGA UAAAGAUG C   |||||||  |||| ||||||||   UGUGGUU  UUCU AUUUUUAC U AU       AG    A        C |
Stem-loop sequence | AUAUCAACUGGGACUAAAGAUGGCUCCAUUUUUAAUCUUGAUUGGUGUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288224.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence | NA | coding protein | psRNATarget |