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BaseInfo

ncRNA ID novel_osa_miR1282
Species Oryza sativa
Class miRNA
Genome position Chr8:23018148-23018197 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR2099428;SRR2099436;SRR2099745;SRR1556014;SRR4407956
Length 24
Mature sequence(if miRNA) 1 - AUAUCAACUGGGACUAAAGAUGGC - 24
Stem-loop(if miRNA) --       CU    C        G
  AUAUCAA  GGGA UAAAGAUG C
  |||||||  |||| ||||||||
  UGUGGUU  UUCU AUUUUUAC U
AU       AG    A        C
Stem-loop sequence AUAUCAACUGGGACUAAAGAUGGCUCCAUUUUUAAUCUUGAUUGGUGUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288224.1
ncRNA:24   CGGUAGAAAUCAGGGUCAACUAUA   1
  ***||||||||||||=|||||||*
targets:1258   CGGAUCUUUAGUCCCGGUUGAUAA   1281

2.5 Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence NA coding protein psRNATarget