ncRNA ID | novel_osa_miR1274 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr10:19573941-19574139 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742995;SRR2040398;SRR1738219 |
Length | 24 |
Mature sequence(if miRNA) | 176 - ACGUAGAUUACCGAUAAAACCGAU - 199 |
Stem-loop(if miRNA) |
--           C         G                                          U              A   A  --------G    AU   ACGUAGAUUAC GAUAAAACC AUUCCAUAACCCCUAGGCUAUUUUGCGAGACGAAUCUAAUGA GUAUAUUAAUCCAU AUU GC         GCUG  U   ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||         ||||  A   UGCAUCUAAUG CUGUUUUGG UAAGGUAUUGGGGAUCCGAUAAAACGCUCUGCUUAGAUUGCU CAUAUAAUUAGGUA UAA CG         CGAU  C UU           A         G                                          C              C   A  AUGUCACUA    GU |
Stem-loop sequence | ACGUAGAUUACCGAUAAAACCGAUUCCAUAACCCCUAGGCUAUUUUGCGAGACGAAUCUAAUGAUGUAUAUUAAUCCAUAAUUAGCGGCUGAUUACUGUAGCAUCACUGUAGCAAAUCAUGGAUUAAUAUACCUCGUUAGAUUCGUCUCGCAAAAUAGCCUAGGGGUUAUGGAAUGGGUUUUGUCAGUAAUCUACGUUU |