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BaseInfo

ncRNA ID novel_osa_miR1274
Species Oryza sativa
Class miRNA
Genome position Chr10:19573941-19574139 [-]
Reference genome IRGSP-1.0
Source SRR1742995;SRR2040398;SRR1738219
Length 24
Mature sequence(if miRNA) 176 - ACGUAGAUUACCGAUAAAACCGAU - 199
Stem-loop(if miRNA) --           C         G                                          U              A   A  --------G    AU
  ACGUAGAUUAC GAUAAAACC AUUCCAUAACCCCUAGGCUAUUUUGCGAGACGAAUCUAAUGA GUAUAUUAAUCCAU AUU GC         GCUG  U
  ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||         ||||  A
  UGCAUCUAAUG CUGUUUUGG UAAGGUAUUGGGGAUCCGAUAAAACGCUCUGCUUAGAUUGCU CAUAUAAUUAGGUA UAA CG         CGAU  C
UU           A         G                                          C              C   A  AUGUCACUA    GU
Stem-loop sequence ACGUAGAUUACCGAUAAAACCGAUUCCAUAACCCCUAGGCUAUUUUGCGAGACGAAUCUAAUGAUGUAUAUUAAUCCAUAAUUAGCGGCUGAUUACUGUAGCAUCACUGUAGCAAAUCAUGGAUUAAUAUACCUCGUUAGAUUCGUCUCGCAAAAUAGCCUAGGGGUUAUGGAAUGGGUUUUGUCAGUAAUCUACGUUU