ncRNA ID | novel_osa_miR1273 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:6992521-6992694 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742995;SRR1743000;SRR1738209 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUUUCUUGACAAACGUUUGACCU - 24 |
Stem-loop(if miRNA) |
--     CU    AAAC        U                AA     A   U     -UU     -UA     A     UUUAU      ACUUU  UGAC    GUUUGACC UUCGUCUUAUUCAAAA  UUUAU UAA UAUAA   UAUUU   UUAUG CUUGA     CAUC   |||||  ||||    |||||||| ||||||||||||||||  ||||| ||| |||||   |||||   ||||| |||||     |||A   UGAAA  AUUG    CAAACUGG GAGCAGAAUAAGUUUU  AAAUA GUU AUAUU   AUGAA   AGUAU GAAUU     GUAA AC     -U    GUUA        U                AA     C   U     UUU     UAC     -     -UCUU    |
Stem-loop sequence | ACUUUCUUGACAAACGUUUGACCUUUCGUCUUAUUCAAAAAAUUUAUAUAAUUAUAAUUUAUUUUAUUAUGACUUGAUUUAUCAUCAAAUGUUCUUUAAGUAUGACAUAAGUAUUUUUAUAUUUGCAUAAAAAUUUUGAAUAAGACGAGUGGUCAAACAUUGGUUAUAAAGUCA |