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BaseInfo

ncRNA ID novel_osa_miR1273
Species Oryza sativa
Class miRNA
Genome position Chr12:6992521-6992694 [+]
Reference genome IRGSP-1.0
Source SRR1742995;SRR1743000;SRR1738209
Length 24
Mature sequence(if miRNA) 1 - ACUUUCUUGACAAACGUUUGACCU - 24
Stem-loop(if miRNA) --     CU    AAAC        U                AA     A   U     -UU     -UA     A     UUUAU   
  ACUUU  UGAC    GUUUGACC UUCGUCUUAUUCAAAA  UUUAU UAA UAUAA   UAUUU   UUAUG CUUGA     CAUC
  |||||  ||||    |||||||| ||||||||||||||||  ||||| ||| |||||   |||||   ||||| |||||     |||A
  UGAAA  AUUG    CAAACUGG GAGCAGAAUAAGUUUU  AAAUA GUU AUAUU   AUGAA   AGUAU GAAUU     GUAA
AC     -U    GUUA        U                AA     C   U     UUU     UAC     -     -UCUU   
Stem-loop sequence ACUUUCUUGACAAACGUUUGACCUUUCGUCUUAUUCAAAAAAUUUAUAUAAUUAUAAUUUAUUUUAUUAUGACUUGAUUUAUCAUCAAAUGUUCUUUAAGUAUGACAUAAGUAUUUUUAUAUUUGCAUAAAAAUUUUGAAUAAGACGAGUGGUCAAACAUUGGUUAUAAAGUCA