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BaseInfo

ncRNA ID	novel_osa_miR1254
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:1975967-1976069 [+]
Reference genome	IRGSP-1.0
Source	SRR1742994
Length	24
Mature sequence(if miRNA)	80 - AUCUUAAUAUAGAGUGGUAUUGGA - 103
Stem-loop(if miRNA)	UAGAUC    -              CUCAUU    -               U       UGCC CUUUAUGUUAAGAU      ACAA UGAAAUAUGUUAGGC U       |||| ||||||||||||||      |||| |||||||||||||||       AUGG GAGAUAUAAUUCUA      UGUU AUUUUAUGUAGUUUG C -AGGUU    U              UAAUUC    C               U
Stem-loop sequence	UAGAUCUGCCCUUUAUGUUAAGAUCUCAUUACAAUGAAAUAUGUUAGGCUUCUGUUUGAUGUAUUUUACUUGUCUUAAUAUCUUAAUAUAGAGUGGUAUUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK064569.1	ncRNA:24   AGGUUAUGGUGAGAUAUAAUUCUA   1   |||=||||=||||||||||||||| targets:126   UCCGAUACUACUCUAUAUUAAGAU   149 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:002-112-D07, full insert sequence	NA	coding protein	psRNATarget
AK288616.1	ncRNA:24   AGGUUAUGGUGAGAUAUAAUUCUA   1   |||=||||*||||||||||||||| targets:2180   UCCGAUACGACUCUAUAUUAAGAU   2203 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090054A10, full insert sequence	NA	coding protein	psRNATarget
AK288229.1	ncRNA:24   AGGUUAUGGUGAGAUAUAAUUCUA   1   ||==|||=||||||*||||||||| targets:93   UCUGAUAUCACUCUUUAUUAAGAU   116 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090012M05, full insert sequence	NA	coding protein	psRNATarget