ncRNA ID | novel_osa_miR1253 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:12176917-12177004 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742994 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAGCAUGAUCGGUUUGCAAUC - 21 |
Stem-loop(if miRNA) |
-UA   -          G    CCAUUGUAUCU     -CCAA   CU    GCA UGAUCGGUUU CAAU           GCCUG     ACU  A    ||| |||||||||| ||||           |||||     |||    CGU GCUAGCCAGA GUUG           UGGAC     UGA  U CGA   U          A    -------UUCU     AAUAA   AA |
Stem-loop sequence | UAGCAUGAUCGGUUUGCAAUCCAUUGUAUCUGCCUGCCAAACUCUAUAAAGUAAUAACAGGUUCUUGUUGAAGACCGAUCGUUGCAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK243156.1 |
|
0.0 | Oryza sativa Japonica Group cDNA, clone: J100033G07, full insert sequence | NA | coding protein | psRNATarget |