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BaseInfo

ncRNA ID	novel_osa_miR1251
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:8620236-8620313 [+]
Reference genome	IRGSP-1.0
Source	SRR1742994
Length	24
Mature sequence(if miRNA)	55 - AUUAGGUUAAAUAUCGAUGUUGAC - 78
Stem-loop(if miRNA)	--        U   C       CA       AA A    U   CAAUAUCG UAU UAACCUA  AUUGGCU  C UCUG C   |||||||| ||| |||||||  |||||||  | ||||   GUUGUAGC AUA AUUGGAU  UAGCCGA  G AGAU A CA        U   A       --       CG A    G
Stem-loop sequence	CAAUAUCGUUAUCUAACCUACAAUUGGCUAACAUCUGUCAGUAGAAGGCAGCCGAUUAGGUUAAAUAUCGAUGUUGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288616.1	ncRNA:24   CAGUUGUAGCUAUAAAUUGGAUUA   1   ||||||||||=|||||||||||=| targets:2512   GUCAACAUCGGUAUUUAACCUAGU   2535 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090054A10, full insert sequence	NA	coding protein	psRNATarget
AK064569.1	ncRNA:24   CAGUUGUAGCUAUAAAUUGGAUUA   1   **|||||||||||||||||||||| targets:457   ACCAACAUCGAUAUUUAACCUAAU   480 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:002-112-D07, full insert sequence	NA	coding protein	psRNATarget
AK288643.1	ncRNA:24   CAGUUGUAGCUAUAAAUUGGAUUA   1   **|||||||||||||||||||||| targets:1571   ACCAACAUCGAUAUUUAACCUAAU   1594 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090056G13, full insert sequence	NA	coding protein	psRNATarget
AK121353.1	ncRNA:24   CAGUUGUAGCUAUAAAUUGGAUUA   1   *||||||||*|||||||||||||| targets:1551   AUCAACAUCAAUAUUUAACCUAAU   1574 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023122B16, full insert sequence	NA	coding protein	psRNATarget