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BaseInfo

ncRNA ID	ath-miR832-3p
Species	Arabidopsis thaliana
Class	miRNA
Genome position	chr4:6413010-6413342 [+]
Reference genome	TAIR10
Source	miRBase
Length	21
Mature sequence(if miRNA)	266 - UUGAUUCCCAAUCCAAGCAAG - 286
Stem-loop(if miRNA)	AAG    AAAAAAUAA  GACAAGUAACAAACAUGAGAAAGGUGAAACUUGCUGGGAUCGGGAAUCGAAAGAUCCGAAAGCCAGUCUUUAGAGGAUUCUGAACGGGCUAGUGAAAGUAAACUUGUGAUGUGACCAUAUUGUGCAAUAUGAAUGUAAGUUGGUGGUGUGGUC    AAAG         GU                                                                                                                                                         A    ||||         ||                                                                                                                                                         U    GUUU         UA                                                                                                                                                         C ---    ---------  AACCUAUAAAACAUUUCCAGUACCGUUUUUUUUUCCACUUGGAACGAACCUAACCCUUAGUUUUCUACGCUUUCCGUUCGAAGUUCUUCUACUACGAUUUGCCCGACUACGAAAGCAAUUCUUUUAUUCACUCUACUGAAUCGGUGGAACACU
Stem-loop sequence	AAGAAAGAAAAAAUAAGUGACAAGUAACAAACAUGAGAAAGGUGAAACUUGCUGGGAUCGGGAAUCGAAAGAUCCGAAAGCCAGUCUUUAGAGGAUUCUGAACGGGCUAGUGAAAGUAAACUUGUGAUGUGACCAUAUUGUGCAAUAUGAAUGUAAGUUGGUGGUGUGGUCAUCUCACAAGGUGGCUAAGUCAUCUCACUUAUUUUCUUAACGAAAGCAUCAGCCCGUUUAGCAUCAUCUUCUUGAAGCUUGCCUUUCGCAUCUUUUGAUUCCCAAUCCAAGCAAGGUUCACCUUUUUUUUUGCCAUGACCUUUACAAAAUAUCCAAAUUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT024890.1	ncRNA:21   GAACGAACCUAACCCUUAGUU   1   *|*|||||||*|||||||||| targets:1043   GUAGCUUGGAGUGGGAAUCAA   1063 Target Full Sequence	2.5	Arabidopsis thaliana At4g30840 mRNA, complete cds	NA	coding protein	psRNATarget
AY086661.1	ncRNA:21   GAACGAACCUAACCCUUAGUU   1   *|*|||||||*|||||||||| targets:1069   GUAGCUUGGAGUGGGAAUCAA   1089 Target Full Sequence	2.5	Arabidopsis thaliana clone 266710 mRNA, complete sequence	NA	coding protein	psRNATarget
NM_119231.3	ncRNA:21   GAACGAACCUAACCCUUAGUU   1   *|*|||||||*|||||||||| targets:1105   GUAGCUUGGAGUGGGAAUCAA   1125 Target Full Sequence	2.5	Arabidopsis thaliana Transducin/WD40 repeat-like superfamily protein mRNA	Transducin/WD40 repeat-like superfamily protein(AT4G30840)	coding protein	psRNATarget
NM_114273.4	ncRNA:21   GAACGAACCUAACCCUUAGUU   1   *||*|||||||||||||||*| targets:600   AUUACUUGGAUUGGGAAUCCA   620 Target Full Sequence	2.5	Arabidopsis thaliana P-loop containing nucleoside triphosphate hydrolases superfamily protein mRNA	P-loop containing nucleoside triphosphate hydrolases superfamily protein(AT3G44050)	coding protein	psRNATarget

Reference

1	PMID:17182867 "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"; Rajagopalan R, Vaucheret H, Trejo J, Bartel DP; Genes Dev. 20:3407-3425(2006).