ncRNA ID | novel_osa_miR1227 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:8723840-8723901 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742994 |
Length | 21 |
Mature sequence(if miRNA) | 42 - UCGUCCGCGUGUGGAUCCGUU - 62 |
Stem-loop(if miRNA) |
--   U    G   -        UAA      CG   UCG CCGC UGU GGAUCCGU   CUAUGG  G   ||| |||| ||| ||||||||   ||||||   GGC GGCG ACG CCUAGGCG   GGUGCC  C UC   -    -   G        ---      AA |
Stem-loop sequence | UCGUCCGCGUGUGGAUCCGUUAACUAUGGCGGCAACCGUGGGCGGAUCCGGCAGCGGCGGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK107163.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-124-F05, full insert sequence | NA | coding protein | psRNATarget |