ncRNA ID | novel_osa_miR1225 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:22103072-22103147 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742994;SRR1742995;SRR2040386;SRR2040392;SRR2040401;SRR2040402;SRR2040409 |
Length | 25 |
Mature sequence(if miRNA) | 52 - UAUCGGAUCUGAUACCUAUGGUACC - 76 |
Stem-loop(if miRNA) |
--           C            CAUAA    CGA   UACCAUGGGUA CAGGUCUGAUAC     AUAU   A   ||||||||||| ||||||||||||     ||||   AUGGUAUCCAU GUCUAGGCUAUG     UAUA   U CC           A            AAUCC    AUC |
Stem-loop sequence | UACCAUGGGUACCAGGUCUGAUACCAUAAAUAUCGAAUCUAAUAUCCUAAGUAUCGGAUCUGAUACCUAUGGUACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK289014.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090089J15, full insert sequence | NA | coding protein | psRNATarget |