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BaseInfo

ncRNA ID novel_osa_miR1223
Species Oryza sativa
Class miRNA
Genome position Chr8:8004338-8004454 [-]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1555747;SRR1555749;SRR2097778;SRR2097779;SRR2098557;SRR2098560;SRR2098822;SRR1556014;SRR4407775;SRR4407777;SRR4407779;SRR4407954;SRR4407955;SRR4407957;SRR1556016;SRR4407958;SRR4407960;SRR4407961;SRR1556020
Length 24
Mature sequence(if miRNA) 1 - AAUGUUACUAUUACUUUGUCGGAU - 24
Stem-loop(if miRNA) --         CG   UA          C       A     --A      A       U
  CCGACAAAG  AAU  UAACAUUGUU ACAAAAU UACAU   UCUCUU UAUAGUU A
  |||||||||  |||  |||||||||| ||||||| |||||   |||||| |||||||
  GGCUGUUUC  UUA  AUUGUAAUAA UGUUUUA AUGUA   AGAGAG AUAUCAA U
UA         -A   UC          A       A     GAG      A       A
Stem-loop sequence CCGACAAAGCGAAUUAUAACAUUGUUCACAAAAUAUACAUAUCUCUUAUAUAGUUUAUAAACUAUAAGAGAGAGAGAUGUAAAUUUUGUAAAUAAUGUUACUAUUACUUUGUCGGAU