ncRNA ID | novel_osa_miR1223 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:8004338-8004454 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1555747;SRR1555749;SRR2097778;SRR2097779;SRR2098557;SRR2098560;SRR2098822;SRR1556014;SRR4407775;SRR4407777;SRR4407779;SRR4407954;SRR4407955;SRR4407957;SRR1556016;SRR4407958;SRR4407960;SRR4407961;SRR1556020 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGUUACUAUUACUUUGUCGGAU - 24 |
Stem-loop(if miRNA) |
--         CG   UA          C       A     --A      A       U   CCGACAAAG  AAU  UAACAUUGUU ACAAAAU UACAU   UCUCUU UAUAGUU A   |||||||||  |||  |||||||||| ||||||| |||||   |||||| |||||||   GGCUGUUUC  UUA  AUUGUAAUAA UGUUUUA AUGUA   AGAGAG AUAUCAA U UA         -A   UC          A       A     GAG      A       A |
Stem-loop sequence | CCGACAAAGCGAAUUAUAACAUUGUUCACAAAAUAUACAUAUCUCUUAUAUAGUUUAUAAACUAUAAGAGAGAGAGAUGUAAAUUUUGUAAAUAAUGUUACUAUUACUUUGUCGGAU |