ncRNA ID | novel_osa_miR1217 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:26756847-26756914 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742994 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGCACAUCAUAGUACUAUGAAUCU - 24 |
Stem-loop(if miRNA) |
---A       A     C         U           GCACAUC UAGUA UAUGAAUCU GAUAGGC     ||||||| ||||| ||||||||| ||||||U     UGUGUAG AUCAU AUGCUUAGA CUAUUCC GCUC       G     U         U       |
Stem-loop sequence | AGCACAUCAUAGUACUAUGAAUCUUGAUAGGCUCCUUAUCUAGAUUCGUAUUACUAGGAUGUGUCUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015787953.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group U-box domain-containing protein 52 (LOC4340371), transcript variant X1, mRNA | U-box domain-containing protein 52(LOC4340371) | coding protein | psRNATarget |