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BaseInfo

ncRNA ID	novel_osa_miR1203
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:21109825-21109868 [-]
Reference genome	IRGSP-1.0
Source	SRR1742993
Length	19
Mature sequence(if miRNA)	26 - UAGCUACGAACCUGGACAC - 44
Stem-loop(if miRNA)	--          C       CG   UAGCUACGAA CUGGACA  C   |||||||||| |||||||   AUCGAUGCUU GACCUGU  A GG          A       AU
Stem-loop sequence	UAGCUACGAACCUGGACACGCAUAUGUCCAGAUUCGUAGCUAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015788744.1	ncRNA:19   CACAGGUCCAAGCAUCGAU   1   ||||||||||||||||||| targets:3006   GUGUCCAGGUUCGUAGCUA   3024 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At5g39710 (LOC4340159), mRNA	pentatricopeptide repeat-containing protein At5g39710(LOC4340159)	coding protein	psRNATarget
AK109570.1	ncRNA:19   CACAGGUCCAAGCAUCGAU   1   ||||=||*||||||||||| targets:491   GUGUUCAAGUUCGUAGCUA   509 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-131-H06, full insert sequence	NA	coding protein	psRNATarget
XM_015786258.1	ncRNA:19   CACAGGUCCAAGCAUCGAU   1   |||||*||||||||||=|| targets:562   GUGUCGAGGUUCGUAGUUA   580 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group submaxillary gland androgen-regulated protein 3A (LOC4341416), mRNA	submaxillary gland androgen-regulated protein 3A(LOC4341416)	coding protein	psRNATarget
AK062563.1	ncRNA:19   CACAGGUCCAAGCAUCGAU   1   |||||*||||||||||=|| targets:549   GUGUCGAGGUUCGUAGUUA   567 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-045-E12, full insert sequence	NA	coding protein	psRNATarget
AK120112.1	ncRNA:19   CACAGGUCCAAGCAUCGAU   1   |||||*||||||||||=|| targets:547   GUGUCGAGGUUCGUAGUUA   565 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013025D20, full insert sequence	NA	coding protein	psRNATarget
AK072157.1	ncRNA:19   CACAGGUCCAAGCAUCGAU   1   *|||||||||||*|||||| targets:1690   AUGUCCAGGUUCAUAGCUA   1708 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013133A10, full insert sequence	NA	coding protein	psRNATarget
AK287566.1	ncRNA:19   CACAGGUCCAAGCAUCGAU   1   *|||||||||||*|||||| targets:1533   CUGUCCAGGUUCAUAGCUA   1551 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065027L04, full insert sequence	NA	coding protein	psRNATarget
XM_015794052.1	ncRNA:19   CACAGGUCCAAGCAUCGAU   1   *|||||||||||*|||||| targets:1531   CUGUCCAGGUUCAUAGCUA   1549 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group zinc finger protein WIP2 (LOC9271702), mRNA	zinc finger protein WIP2(LOC9271702)	coding protein	psRNATarget
XM_015783521.1	ncRNA:19   CACAGGUCCAAGCAUCGAU   1   ||*|||||||||||||*|| targets:1808   GUCUCCAGGUUCGUAGGUA   1826 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group disease resistance protein RGA2-like (LOC107278434), transcript variant X1, mRNA	disease resistance protein RGA2-like(LOC107278434)	coding protein	psRNATarget
XM_015783522.1	ncRNA:19   CACAGGUCCAAGCAUCGAU   1   ||*|||||||||||||*|| targets:1808   GUCUCCAGGUUCGUAGGUA   1826 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group disease resistance protein RGA2-like (LOC107278434), transcript variant X2, mRNA	disease resistance protein RGA2-like(LOC107278434)	coding protein	psRNATarget