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BaseInfo

ncRNA ID novel_osa_miR1199
Species Oryza sativa
Class miRNA
Genome position Chr8:26181393-26181456 [+]
Reference genome IRGSP-1.0
Source SRR1742993;SRR1849770;SRR1738223;SRR1738224
Length 24
Mature sequence(if miRNA) 1 - UUACAUGUAUAAAAUUCUGAGGAU - 24
Stem-loop(if miRNA) --                             A
  UUACAUGUAUAAAAUUCUGAGGAUGUUAU U
  |||||||||||||||||||||||||||||
  AAUGUACAUAUUUUAGGACUCCUACAGUA A
GA                             U
Stem-loop sequence UUACAUGUAUAAAAUUCUGAGGAUGUUAUAUAUAUGACAUCCUCAGGAUUUUAUACAUGUAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI404241.1
ncRNA:24   UAGGAGUCUUAAAAUAUGUACAUU   1
  ||||||||=|||||||||||||||
targets:50   AUCCUCAGGAUUUUAUACAUGUAA   73

1.0 Sequence 2366 from Patent EP2074227 NA coding protein psRNATarget
LQ236371.1
ncRNA:24   UAGGAGUCUUAAAAUAUGUACAUU   1
  ||||||||=|||||||||||||||
targets:50   AUCCUCAGGAUUUUAUACAUGUAA   73

1.0 Sequence 2366 from Patent EP2985353 NA coding protein psRNATarget
JB164702.1
ncRNA:24   UAGGAGUCUUAAAAUAUGUACAUU   1
  ||||||||=|||||||||||||||
targets:50   AUCCUCAGGAUUUUAUACAUGUAA   73

1.0 Sequence 2366 from Patent EP2559767 NA coding protein psRNATarget