ncRNA ID | novel_osa_miR1194 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:2203982-2204066 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1555749;SRR2097779;SRR2098560;SRR1555751;SRR2458631;SRR1556011;SRR1556014;SRR4407775;SRR4407777;SRR1556016;SRR1556018;SRR1654490 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACGGCACGGCUACUGUAGCGGCAC - 24 |
Stem-loop(if miRNA) |
--  A  GC  G                 ----   G    U      GC CG  AC AGUAGCCGUGCCGUGCU    UGG CCGC GGCC   || ||  || |||||||||||||||||    ||| |||| |||G   CG GC  UG UCAUCGGCACGGCACGG    GCC GGCG CCGA CA  -  GA  -                 CACG   G    C    |
Stem-loop sequence | GCACGGCACGAGUAGCCGUGCCGUGCUUGGGCCGCUGGCCGAGCCCGCGGGCCGGCACGGCACGGCACGGCUACUGUAGCGGCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015775977.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280456 (LOC107280456), mRNA | uncharacterized LOC107280456(LOC107280456) | coding protein | psRNATarget |