Search result

BaseInfo

ncRNA ID novel_osa_miR1176
Species Oryza sativa
Class miRNA
Genome position Chr6:15366656-15366704 [-]
Reference genome IRGSP-1.0
Source SRR1742993
Length 22
Mature sequence(if miRNA) 1 - CAUUUGACUAGCUAAACUGCCU - 22
Stem-loop(if miRNA) --A   AC      U UG      
   CAG  UAGCUA U  AAUGGCU
   |||  |||||| |  ||||||A
   GUC  AUCGAU A  UUACCGA
UCC   AA      C GU      
Stem-loop sequence ACAGACUAGCUAUUUGAAUGGCUAAGCCAUUUGACUAGCUAAACUGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015764164.1
ncRNA:22   UCCGUCAAAUCGAUCAGUUUAC   1
  ||*|*||*||||||||||||||
targets:1747   AGUCUGUCUAGCUAGUCAAAUG   1768

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277713 (LOC107277713), mRNA uncharacterized LOC107277713(LOC107277713) coding protein psRNATarget
AK288109.1
ncRNA:22   UCCGUCAAAUCGAUCAGUUUAC   1
  ||*|*||*||||||||||||||
targets:1757   AGUCUGUCUAGCUAGUCAAAUG   1778

2.0 Oryza sativa Japonica Group cDNA, clone: J075198O10, full insert sequence NA coding protein psRNATarget