ncRNA ID | novel_osa_miR1176 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:15366656-15366704 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742993 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CAUUUGACUAGCUAAACUGCCU - 22 |
Stem-loop(if miRNA) |
--A   AC      U UG          CAG  UAGCUA U  AAUGGCU    |||  |||||| |  ||||||A    GUC  AUCGAU A  UUACCGA UCC   AA      C GU       |
Stem-loop sequence | ACAGACUAGCUAUUUGAAUGGCUAAGCCAUUUGACUAGCUAAACUGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015764164.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277713 (LOC107277713), mRNA | uncharacterized LOC107277713(LOC107277713) | coding protein | psRNATarget | |||||||||
AK288109.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J075198O10, full insert sequence | NA | coding protein | psRNATarget |