ncRNA ID | novel_osa_miR1175 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr5:17383144-17383229 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742993;SRR2099568 |
Length | 24 |
Mature sequence(if miRNA) | 63 - UACACUGUAACUUUUAGUAGAUGG - 86 |
Stem-loop(if miRNA) |
--    C    -U       C       A             GU   AUCU ACUA  AGUUACA UGUAAUU CACUAUAGUUACA  A   |||| ||||  ||||||| ||||||| |||||||||||||   UAGA UGAU  UCAAUGU ACAUUAA GUGAUAUCAAUGU  C GG    -    UU       C       A             GA |
Stem-loop sequence | AUCUCACUAUAGUUACACUGUAAUUACACUAUAGUUACAGUACAGUGUAACUAUAGUGAAAUUACACUGUAACUUUUAGUAGAUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK243119.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J100028G14, full insert sequence | NA | coding protein | psRNATarget |