ncRNA ID | novel_osa_miR1163 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:7253965-7254088 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742993;SRR2040408;SRR2857731 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACGUGAUAGGAAUCGUCUGAUACC - 24 |
Stem-loop(if miRNA) |
--     A       C  C        GA      GUAGA     A     C     A      A   ACGUG UAGGAAU GU UGAUACCU  UACGUG     AUCAC UGAUA CUGGU GGUAUC C   ||||| ||||||| || ||||||||  ||||||     ||||| ||||| ||||| ||||||   UGCAC AUUCUUA CA ACUAUGGG  AUGUAC     UAGUG ACUAU GAUCG CCAUAG C GA     C       A  U        --      ----A     G     U     A      C |
Stem-loop sequence | ACGUGAUAGGAAUCGUCUGAUACCUGAUACGUGGUAGAAUCACAUGAUACCUGGUAGGUAUCACCCGAUACCAGCUAGUUAUCAGGUGAUACAUGUAGGGUAUCAUACAAUUCUUACCACGUAG |