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BaseInfo

ncRNA ID novel_osa_miR1162
Species Oryza sativa
Class miRNA
Genome position Chr4:806560-806604 [-]
Reference genome IRGSP-1.0
Source SRR1742993
Length 21
Mature sequence(if miRNA) 25 - UUUUGGAUCAUACUAUGAGCU - 45
Stem-loop(if miRNA) ---UU       A AC      C
     UUGGAUC U  UAUGAG U
     ||||||| |  |||||| U
     AAUCUAG A  AUACUC U
AUAAC       - GA      A
Stem-loop sequence UUUUGGAUCAUACUAUGAGCUUUACUCAUAAGAGAUCUAACAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK318524.1
ncRNA:21   UCGAGUAUCAUACUAGGUUUU   1
  |||||||||||*|||||||||
targets:3945   AGCUCAUAGUACGAUCCAAAA   3965

1.5 Oryza sativa Japonica Group cDNA, clone: J065057P07, full insert sequence NA coding protein psRNATarget