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BaseInfo

ncRNA ID	novel_osa_miR1161
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:6464629-6464691 [+]
Reference genome	IRGSP-1.0
Source	SRR1742993
Length	24
Mature sequence(if miRNA)	40 - AAGAGAGAUAUGUAAAUUUUGUGA - 63
Stem-loop(if miRNA)	--                    A       U   ACAAAAUUUACAUAUCUCUU UAUGGUU U   |||||||||||||||||||| ||||||| C   UGUUUUAAAUGUAUAGAGAG AUAUCAA U AG                    A       A
Stem-loop sequence	ACAAAAUUUACAUAUCUCUUAUAUGGUUUUCUAAACUAUAAGAGAGAUAUGUAAAUUUUGUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ236694.1	ncRNA:24   AGUGUUUUAAAUGUAUAGAGAGAA   1   |||||||||||||||||||||||| targets:40   UCACAAAAUUUACAUAUCUCUCUU   63 Target Full Sequence	0.0	Sequence 2689 from Patent EP2985353	NA	coding protein	psRNATarget
JB165025.1	ncRNA:24   AGUGUUUUAAAUGUAUAGAGAGAA   1   |||||||||||||||||||||||| targets:40   UCACAAAAUUUACAUAUCUCUCUU   63 Target Full Sequence	0.0	Sequence 2689 from Patent EP2559767	NA	coding protein	psRNATarget
HI404564.1	ncRNA:24   AGUGUUUUAAAUGUAUAGAGAGAA   1   |||||||||||||||||||||||| targets:40   UCACAAAAUUUACAUAUCUCUCUU   63 Target Full Sequence	0.0	Sequence 2689 from Patent EP2074227	NA	coding protein	psRNATarget
AK289001.1	ncRNA:24   AGUGUUUUAAAUGUAUAGAGAGAA   1   |||||||||||||||*|||||||| targets:43   UCACAAAAUUUACAUCUCUCUCUU   66 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090088H22, full insert sequence	NA	coding protein	psRNATarget