Search result

BaseInfo

ncRNA ID novel_osa_miR1155
Species Oryza sativa
Class miRNA
Genome position Chr3:15761334-15761456 [+]
Reference genome IRGSP-1.0
Source SRR1742993;SRR1738217;SRR1738221
Length 24
Mature sequence(if miRNA) 100 - CACCGAGAACGGUCACAUGAGCUC - 123
Stem-loop(if miRNA) --   -    -   -        U  CG        U   -UC    AAAC     A -GU   - G
  GCU AUGU ACU UUCUUGGU GA  UCGGAGAU GAC   AGAC    CCUUU G   GCC C C
  ||| |||| ||| |||||||| ||  |||||||| |||   ||||    ||||| |   ||| |
  CGA UACA UGG AAGAGCCA CU  AGUCUCUA UUG   UCUG    GGAAA C   CGG G A
CU   G    C   C        -  CA        -   CAA    --AA     - AGU   A C
Stem-loop sequence GCUAUGUACUUUCUUGGUUGACGUCGGAGAUUGACUCAGACAAACCCUUUAGGUGCCCGCACGAGGCUGACAAAGGAAGUCUAACGUUAUCUCUGAACUCACCGAGAACGGUCACAUGAGCUC