ncRNA ID | novel_osa_miR1142 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:3563189-3563237 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742993 |
Length | 22 |
Mature sequence(if miRNA) | 1 - GUGCGCGCACGGCCGUCGAGUU - 22 |
Stem-loop(if miRNA) |
--    C    G  C         C   CUCG CGGU CG GCGUGCACC G   |||| |||| || |||||||||   GAGC GCCG GC CGCGCGUGG C UU    U    -  A         G |
Stem-loop sequence | CUCGCCGGUGCGCGCGUGCACCCGCGGGUGCGCGCACGGCCGUCGAGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK111317.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:002-181-C10, full insert sequence | NA | coding protein | psRNATarget |