Search result

BaseInfo

ncRNA ID novel_osa_miR1142
Species Oryza sativa
Class miRNA
Genome position Chr2:3563189-3563237 [-]
Reference genome IRGSP-1.0
Source SRR1742993
Length 22
Mature sequence(if miRNA) 1 - GUGCGCGCACGGCCGUCGAGUU - 22
Stem-loop(if miRNA) --    C    G  C         C
  CUCG CGGU CG GCGUGCACC G
  |||| |||| || |||||||||
  GAGC GCCG GC CGCGCGUGG C
UU    U    -  A         G
Stem-loop sequence CUCGCCGGUGCGCGCGUGCACCCGCGGGUGCGCGCACGGCCGUCGAGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK111317.1
ncRNA:22   UUGAGCUGCCGGCACGCGCGUG   1
  *||||||||||||*||||||||
targets:558   CACUCGACGGCCGCGCGCGCAC   579

1.5 Oryza sativa Japonica Group cDNA clone:002-181-C10, full insert sequence NA coding protein psRNATarget