ncRNA ID | novel_osa_miR1141 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:12279796-12279935 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742993;SRR1738217 |
Length | 24 |
Mature sequence(if miRNA) | 117 - CUUGAUGUCAUAGUAGUAGAACCU - 140 |
Stem-loop(if miRNA) |
--         A  G  -     A     -    CCAA  -     -     -GGCGCG  ACU   G  A   G   CUUGAUGUC UA UA GUAGA CCUUG AGCA    GU UCCCG UACCU       CC   GUC AC GGG A   ||||||||| || || ||||| ||||| ||||    || ||||| |||||       ||   ||| || |||   GAACUACAG AU AU CAUCU GGAAC UCGU    CA GGGGU AUGGG       GG   CAG UG CCC C AG         C  G  G     A     A    --CG  U     U     AGAUAUA  --C   A  -   A |
Stem-loop sequence | CUUGAUGUCAUAGUAGUAGAACCUUGAGCACCAAGUUCCCGUACCUGGCGCGCCACUGUCGACAGGGGACACCCGUAGACCGGAUAUAGAGGGUAUUGGGGUACGCUGCUACAAGGAUCUACGUAGUACGACAUCAAGGA |