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BaseInfo

ncRNA ID novel_osa_miR1124
Species Oryza sativa
Class miRNA
Genome position Chr12:8168943-8168992 [+]
Reference genome IRGSP-1.0
Source SRR1742993
Length 22
Mature sequence(if miRNA) 29 - UGCCGGGCGGGCCUUUUGGCCA - 50
Stem-loop(if miRNA) G    UGGGCCGUGCCUGGGCCUG
 CUGG                   G
 ||||
 CCGG                   C
A    UUUUCCGGGCGGGCCGUGC
Stem-loop sequence GCUGGUGGGCCGUGCCUGGGCCUGGCCGUGCCGGGCGGGCCUUUUGGCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT837959.1
ncRNA:22   ACCGGUUUUCCGGGCGGGCCGU   1
  ||||||||=|||||||||||||
targets:626   UGGCCAAAGGGCCCGCCCGGCA   647

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN077D03, full insert sequence NA coding protein psRNATarget
AK288691.1
ncRNA:22   ACCGGUUUUCCGGGCGGGCCGU   1
  ||||||*|||||||||||||||
targets:753   UGGCCAUAAGGCCCGCCCGGCA   774

1.0 Oryza sativa Japonica Group cDNA, clone: J090060J18, full insert sequence NA coding protein psRNATarget