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BaseInfo

ncRNA ID	novel_osa_miR1118
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:20566816-20566881 [-]
Reference genome	IRGSP-1.0
Source	SRR1742993
Length	24
Mature sequence(if miRNA)	43 - GGUGCCGAGCUCGUCGCGGAUCGG - 66
Stem-loop(if miRNA)	--        -  U    G  GA  G C     CG   GGUGCCGA GC CGUC CG  UC G GCCGC  A   |||||||| || |||| ||  || | |||||   CCGCGGCU CG GCAG GC  AG C CGGCG  C AG        G  -    G  -G  G -     UG
Stem-loop sequence	GGUGCCGAGCUCGUCGCGGAUCGGCGCCGCCGACGUGCGGCCGGAGCGGGACGGCGUCGGCGCCGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK119835.1	ncRNA:24   GGCUAGGCGCUGCUCGAGCCGUGG   1   *||=||||||*||||||||*|||| targets:548   GCGGUCCGCGUCGAGCUCGUCACC   571 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-178-A12, full insert sequence	NA	coding protein	psRNATarget
AK106314.1	ncRNA:24   GGCUAGGCGCUGCUCGAGCCGUGG   1   =||=-||*|||||||||||||||| targets:1105   UCGG-CCACGACGAGCUCGGCACC   1127 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:002-101-D09, full insert sequence	NA	coding protein	psRNATarget
XM_015789157.1	ncRNA:24   GGCUAGGCGCUGCUCGAGCCGUGG   1   *||=*|||||=|||||*||||||| targets:347   GCGGCCCGCGGCGAGCGCGGCACC   370 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group serine/threonine-protein kinase CDL1 (LOC4344229), transcript variant X1, mRNA	serine/threonine-protein kinase CDL1(LOC4344229)	coding protein	psRNATarget
XM_015789158.1	ncRNA:24   GGCUAGGCGCUGCUCGAGCCGUGG   1   *||=*|||||=|||||*||||||| targets:345   GCGGCCCGCGGCGAGCGCGGCACC   368 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group serine/threonine-protein kinase CDL1 (LOC4344229), transcript variant X2, mRNA	serine/threonine-protein kinase CDL1(LOC4344229)	coding protein	psRNATarget
AK067054.1	ncRNA:24   GGCUAGGCGCUGCUCGAGCCGUGG   1   *||=*|||||=|||||*||||||| targets:321   GCGGCCCGCGGCGAGCGCGGCACC   344 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013092F03, full insert sequence	NA	coding protein	psRNATarget
XM_015787750.1	ncRNA:24   GGCUAGGCGCUGCUCGAGCCGUGG   1   |||**|||||*||||||||||=|| targets:661   CCGCACCGCGUCGAGCUCGGCGCC   684 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340058 (LOC4340058), mRNA	uncharacterized LOC4340058(Os06g0139150)	coding protein	psRNATarget
AK105368.1	ncRNA:24   GGCUAGGCGCUGCUCGAGCCGUGG   1   |||**|||||*||||||||||=|| targets:667   CCGCACCGCGUCGAGCUCGGCGCC   690 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-119-H06, full insert sequence	NA	coding protein	psRNATarget