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BaseInfo

ncRNA ID	novel_osa_miR1104
Species	Oryza sativa
Class	miRNA
Genome position	Chr7:13222614-13222740 [+]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1555747;SRR1556014;SRR1556020
Length	24
Mature sequence(if miRNA)	104 - AUACAUGUAGUUUUGUGAAAUUUA - 127
Stem-loop(if miRNA)	--    G       -        -------------GU     GAUAAACAGAUACACUAAAUCUAUAGU   GAUU UACAAAG UACGUGUA               UUUGU                           U   |||| ||||||| ||||||||               |||||                           U   UUAA GUGUUUU AUGUACAU               GUGUU                           U AU    A       G        AUAAUGUGUUAAAUA     UUGAUGUAUAAAUUCUCGAACAAAGGG
Stem-loop sequence	GAUUGUACAAAGUACGUGUAGUUUUGUGAUAAACAGAUACACUAAAUCUAUAGUUUUGGGAAACAAGCUCUUAAAUAUGUAGUUUUGUGAUAAAUUGUGUAAUAUACAUGUAGUUUUGUGAAAUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015761246.1	ncRNA:24   AUUUAAAGUGUUUUGAUGUACAUA   1   |||||||||=|||||||||||||| targets:1754   UAAAUUUCAUAAAACUACAUGUAU   1777 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group cytochrome P450 72A14 (LOC4323921), mRNA	cytochrome P450 72A14(LOC4323921)	coding protein	psRNATarget
AK073238.1	ncRNA:24   AUUUAAAGUGUUUUGAUGUACAUA   1   |||||||||=|||||||||||||| targets:1720   UAAAUUUCAUAAAACUACAUGUAU   1743 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J033015M03, full insert sequence	NA	coding protein	psRNATarget
XM_015787205.1	ncRNA:24   AUUUAAAGUGUUUUGAUGUACAUA   1   |||||||||=||||||||||||*| targets:377   UAAAUUUCAUAAAACUACAUGUUU   400 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278395 (LOC107278395), transcript variant X1, mRNA	uncharacterized LOC107278395(LOC107278395)	coding protein	psRNATarget
AK288881.1	ncRNA:24   AUUUAAAGUGUUUUGAUGUACAUA   1   |||||||||||||||||||*|||* targets:377   UAAAUUUCACAAAACUACAGGUAA   400 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090079G03, full insert sequence	NA	coding protein	psRNATarget
XM_015792093.1	ncRNA:24   AUUUAAAGUGUUUUGAUGUACAUA   1   ||||||||||||||||||||*||* targets:3117   UAAAUUUCACAAAACUACAUAUAC   3140 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At1g13040, mitochondrial (LOC4344353), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At1g13040, mitochondrial(LOC4344353)	coding protein	psRNATarget
AK101635.1	ncRNA:24   AUUUAAAGUGUUUUGAUGUACAUA   1   ||||||||||||||||||||*||* targets:2973   UAAAUUUCACAAAACUACAUAUAC   2996 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033055B02, full insert sequence	NA	coding protein	psRNATarget
AK288887.1	ncRNA:24   AUUUAAAGUGUUUUGAUGUACAUA   1   |||*||||||||||||||||||*| targets:1864   UAAUUUUCACAAAACUACAUGUUU   1887 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090079L15, full insert sequence	NA	coding protein	psRNATarget