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BaseInfo

ncRNA ID	novel_osa_miR1095
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:7341241-7341353 [+]
Reference genome	IRGSP-1.0
Source	SRR1742992
Length	24
Mature sequence(if miRNA)	1 - AAGACUUUAUAGUAUUGCCCACAU - 24
Stem-loop(if miRNA)	--        -A        C             G        A   U   GC CAC   AAGACUUU  UAGUAUUG CCACAUUCAUAUA AUGUUAAU AAU UAG  A   A   ||||||||  |||||||| ||||||||||||| |||||||| ||| |||  |   UUCUGAAA  AUCGUAAC GGUGUAAGUAUAU UACAAUUA UUA AUC  U   U UA        AG        A             A        C   U   UA AUA
Stem-loop sequence	AAGACUUUAUAGUAUUGCCCACAUUCAUAUAGAUGUUAAUAAAUUUAGGCACACAUAUAUAUCUAUAUUCAUUAACAUAUAUAUGAAUGUGGACAAUGCUAGAAAAGUCUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT828736.1	ncRNA:24   UACACCCGUUAUGAUAUUUCAGAA   1   |||||||*|||||||*|||||||| targets:749   AUGUGGGAAAUACUAGAAAGUCUU   772 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA125N05, full insert sequence	NA	coding protein	psRNATarget
CT832555.1	ncRNA:24   UACACCCGUUAUGAUAUUUCAGAA   1   |||||||*|||||||*|||||||| targets:1357   AUGUGGGAAAUACUAGAAAGUCUU   1380 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110J22, full insert sequence	NA	coding protein	psRNATarget
AK068770.1	ncRNA:24   UACACCCGUUAUGAUAUUUCAGAA   1   |||||||*|||||||*|||||||| targets:1608   AUGUGGGAAAUACUAGAAAGUCUU   1631 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013169P07, full insert sequence	NA	coding protein	psRNATarget
XM_015767451.1	ncRNA:24   UACACCCGUUAUGAUAUUUCAGAA   1   |||||||*|||||||*|||||||| targets:1364   AUGUGGGAAAUACUAGAAAGUCUU   1387 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4328324 (LOC4328324), transcript variant X2, mRNA	uncharacterized LOC4328324(LOC4328324)	coding protein	psRNATarget
XM_015767450.1	ncRNA:24   UACACCCGUUAUGAUAUUUCAGAA   1   |||||||*|||||||*|||||||| targets:1364   AUGUGGGAAAUACUAGAAAGUCUU   1387 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4328324 (LOC4328324), transcript variant X1, mRNA	uncharacterized LOC4328324(LOC4328324)	coding protein	psRNATarget
AK070155.1	ncRNA:24   UACACCCGUUAUGAUAUUUCAGAA   1   |||||||*|||||||*|||||||| targets:1358   AUGUGGGAAAUACUAGAAAGUCUU   1381 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023047M11, full insert sequence	NA	coding protein	psRNATarget