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BaseInfo

ncRNA ID	novel_osa_miR1093
Species	Oryza sativa
Class	miRNA
Genome position	Chr9:813891-813950 [+]
Reference genome	IRGSP-1.0
Source	SRR1742992
Length	23
Mature sequence(if miRNA)	38 - ACGGUUACACCUGACAUGUGGGC - 60
Stem-loop(if miRNA)	--  U    G   U      A       CA   CC CAUG CGG UGUGGC GUUAUGA  G   || |||| ||| |||||| |||||||   GG GUAC GUC ACAUUG CAGUACU  U CG  U    A   C      G       UU
Stem-loop sequence	CCUCAUGGCGGUUGUGGCAGUUAUGACAGUUUUCAUGACGGUUACACCUGACAUGUGGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT129341.1	ncRNA:23   CGG-GUGUACAGUCCACAUUGGCA   1   ||=-=|||||||||||||*||||| targets:611   GCUGUACAUGUCAGGUGUUACCGU   634 Target Full Sequence	1.5	Oryza sativa clone RRlibA00091 mRNA sequence	NA	coding protein	psRNATarget
AK069234.1	ncRNA:23   CGG-GUGUACAGUCCACAUUGGCA   1   ||=-=|||||||||||||*||||| targets:2592   GCUGUACAUGUCAGGUGUUACCGU   2615 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023010G02, full insert sequence	NA	coding protein	psRNATarget
XM_015772140.1	ncRNA:23   CGG-GUGUACAGUCCACAUUGGCA   1   ||=-=|||||||||||||*||||| targets:2666   GCUGUACAUGUCAGGUGUUACCGU   2689 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group receptor-like serine/threonine-protein kinase ALE2 (LOC4331134), transcript variant X1, mRNA	receptor-like serine/threonine-protein kinase ALE2(LOC4331134)	coding protein	psRNATarget
AK102246.1	ncRNA:23   CGG-GUGUACAGUCCACAUUGGCA   1   ||=-=|||||||||||||*||||| targets:3060   GCUGUACAUGUCAGGUGUUACCGU   3083 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J033088F01, full insert sequence	NA	coding protein	psRNATarget
XM_015772141.1	ncRNA:23   CGG-GUGUACAGUCCACAUUGGCA   1   ||=-=|||||||||||||*||||| targets:3059   GCUGUACAUGUCAGGUGUUACCGU   3082 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group receptor-like serine/threonine-protein kinase ALE2 (LOC4331134), transcript variant X2, mRNA	receptor-like serine/threonine-protein kinase ALE2(LOC4331134)	coding protein	psRNATarget