| ncRNA ID | novel_osa_miR1091 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr1:26823289-26823460 [-] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1742992;SRR1849773;SRR2857734;SRR3123645;SRR3123651;SRR3234042;SRR1609313;SRR1609315;SRR1738223;SRR1738226;SRR1738240 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - UUGGACUGAAGGGUGCUCCCU - 21 |
| Stem-loop(if miRNA) |
-GA U CU U U --UUA G AA U AC AAGU G GAGC CUCUUCAGUCCA C CAGAUGGC GUAGGGUU UUAGCU CCG UCAUCCA UC CUACCAAGA UGCA G |||| |||||||||||| | |||||||| |||||||| |||||| ||| ||||||| || ||||||||| |||| CUCG GGGAAGUCAGGU G GUUUGCCG CGUCUCGA AAUCGA GGC AGUAGGU AG GAUGGUUCU AUGU A UCC U UG U - UUUAA G GC C GC --CU G |
| Stem-loop sequence | GAGAGCUCUCUUCAGUCCACUCUCAGAUGGCUGUAGGGUUUUAUUAGCUGCCGAAUCAUCCAUUCACCUACCAAGAAAGUUGCAGGAGUGUAUCUCUUGGUAGCGGACUGGAUGACGCGGGAGCUAAAAUUUAGCUCUGCGCCGUUUGUGGUUGGACUGAAGGGUGCUCCCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK106830.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-116-F07, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AB071808.1 |
|
2.5 | Oryza sativa Japonica Group mRNA for transcription factor PCF8, partial cds | NA | coding protein | psRNATarget | |||||||||
| XM_015763846.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group transcription factor PCF8 (LOC4352799), mRNA | transcription factor PCF8(LOC4352799) | coding protein | psRNATarget |