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BaseInfo

ncRNA ID novel_osa_miR1090
Species Oryza sativa
Class miRNA
Genome position Chr8:23993425-23993576 [+]
Reference genome IRGSP-1.0
Source SRR1742992;SRR2040398
Length 24
Mature sequence(if miRNA) 129 - CCGUUGUGCCGUGUAAAGGGCAUG - 152
Stem-loop(if miRNA) --  AA     UG           C  A  UC AU     C  A U                  -   -A     CA
  UG  CUUUA  UGGCAUAACGG UC CC  U  GGGUA AC G GUGGAAGCGGACAAAGUC UCU  GCUCA  A
  ||  |||||  ||||||||||| || ||  |  ||||| || | |||||||||||||||||| |||  |||||
  AC  GAAAU  GCCGUGUUGCC AG GG  A  UCCGU UG C CGCCUUCGCCUGUUUCAG AGA  UGAGU  A
GU  GG     GU           A  A  UU CG     C  G U                  U   GG     AG
Stem-loop sequence UGAACUUUAUGUGGCAUAACGGCUCACCUCUAUGGGUACACAGUGUGGAAGCGGACAAAGUCUCUAGCUCACAAAGAUGAGUGGAGAUGACUUUGUCCGCUUCCGCUCGGUCUGCCUGCAUUGGAGAACCGUUGUGCCGUGUAAAGGGCAUG