ncRNA ID | novel_osa_miR1090 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:23993425-23993576 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742992;SRR2040398 |
Length | 24 |
Mature sequence(if miRNA) | 129 - CCGUUGUGCCGUGUAAAGGGCAUG - 152 |
Stem-loop(if miRNA) |
--  AA     UG           C  A  UC AU     C  A U                  -   -A     CA   UG  CUUUA  UGGCAUAACGG UC CC  U  GGGUA AC G GUGGAAGCGGACAAAGUC UCU  GCUCA  A   ||  |||||  ||||||||||| || ||  |  ||||| || | |||||||||||||||||| |||  |||||   AC  GAAAU  GCCGUGUUGCC AG GG  A  UCCGU UG C CGCCUUCGCCUGUUUCAG AGA  UGAGU  A GU  GG     GU           A  A  UU CG     C  G U                  U   GG     AG |
Stem-loop sequence | UGAACUUUAUGUGGCAUAACGGCUCACCUCUAUGGGUACACAGUGUGGAAGCGGACAAAGUCUCUAGCUCACAAAGAUGAGUGGAGAUGACUUUGUCCGCUUCCGCUCGGUCUGCCUGCAUUGGAGAACCGUUGUGCCGUGUAAAGGGCAUG |