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BaseInfo

ncRNA ID novel_osa_miR1089
Species Oryza sativa
Class miRNA
Genome position Chr7:9122418-9122536 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1849770;SRR2040395;SRR1555751;SRR2857729;SRR2857732;SRR1556014;SRR1556018
Length 24
Mature sequence(if miRNA) 1 - AGAUUGCUUUCAAGGUCAUUUCUU - 24
Stem-loop(if miRNA) --       U              U           CA        A  U     U   A
  AGAUUGC UUCAAGGUCAUUUC UUAGGGAACCC  UUCCCAUA AU CAGUA CCA A
  ||||||| |||||||||||||| |||||||||||  |||||||| || ||||| |||
  UCUAACG AGGUUCUAGUAAAG AAUCCCUUGGG  AAGGGUAU UA GUUGU GGU G
GA       C              C           -A        C  U     U   C
Stem-loop sequence AGAUUGCUUUCAAGGUCAUUUCUUUAGGGAACCCCAUUCCCAUAAAUUCAGUAUCCAAAGCUGGUUGUUGUAUCUAUGGGAAAGGGUUCCCUAACGAAAUGAUCUUGGACGCAAUCUAG