ncRNA ID | novel_osa_miR1087 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:16233163-16233206 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742992;SRR1742993;SRR1738209;SRR1738210;SRR1738223 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUUGGAUCAUACUAUGAGCU - 21 |
Stem-loop(if miRNA) |
---         AUA       C    UUUUGGAUC   CUAUGAG U    |||||||||   ||||||| U    AAAAUCUAG   GAUACUC U AUA         --A       A |
Stem-loop sequence | UUUUGGAUCAUACUAUGAGCUUUACUCAUAGAGAUCUAAAAAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK318524.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J065057P07, full insert sequence | NA | coding protein | psRNATarget |