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BaseInfo

ncRNA ID novel_osa_miR1087
Species Oryza sativa
Class miRNA
Genome position Chr8:16233163-16233206 [+]
Reference genome IRGSP-1.0
Source SRR1742992;SRR1742993;SRR1738209;SRR1738210;SRR1738223
Length 21
Mature sequence(if miRNA) 1 - UUUUGGAUCAUACUAUGAGCU - 21
Stem-loop(if miRNA) ---         AUA       C
   UUUUGGAUC   CUAUGAG U
   |||||||||   ||||||| U
   AAAAUCUAG   GAUACUC U
AUA         --A       A
Stem-loop sequence UUUUGGAUCAUACUAUGAGCUUUACUCAUAGAGAUCUAAAAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK318524.1
ncRNA:21   UCGAGUAUCAUACUAGGUUUU   1
  |||||||||||*|||||||||
targets:3945   AGCUCAUAGUACGAUCCAAAA   3965

1.5 Oryza sativa Japonica Group cDNA, clone: J065057P07, full insert sequence NA coding protein psRNATarget